GRINA

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:51.9 FPKM
GTEx:99.4 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Low
Keratinocytes:Low
Langerhans:Not detected
Melanocytes:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA036980

 

Antibody HPA036981

 

Fibroblasts

Low   Medium  

Keratinocytes

Low   Medium  

Langerhans

Not detected   Not detected  

Melanocytes

Medium   Medium  
   
   

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:Low
 
 
 
 

Antibody staining

Antibody HPA036980

 

Antibody HPA036981

 

Epidermal cells

Low   Low  
      
      
      
   
   

SKIN - HPA RNA-seq

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Average FPKM

51.9

overview Female, age 34
Sample 1
FPKM: 47.2
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 35.8
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 72.8

SKIN - GTEx RNA-seq

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Average RPKM

99.4

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 96.3
Samples: 250

Max RPKM: 215.4
Min RPKM: 40.3
Std RPKM: 28.2
Median RPKM: 89.9
GTEX-WI4N-2726-SM-3LK7Y 215.4
GTEX-YB5K-2026-SM-4VDT3 184.0
GTEX-1497J-0226-SM-5QGPU 175.4
GTEX-Y8LW-1526-SM-5IFHL 173.9
GTEX-13113-1626-SM-5EQ4I 170.3
GTEX-ZYW4-0626-SM-59HJR 160.5
GTEX-WFG7-2026-SM-5SI7P 157.6
GTEX-145ME-1726-SM-5Q5EU 157.1
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 102.4
Samples: 357

Max RPKM: 257.7
Min RPKM: 47.4
Std RPKM: 29.4
Median RPKM: 98.1
GTEX-WI4N-1026-SM-3LK7N 257.7
GTEX-13113-1926-SM-5LZWG 184.3
GTEX-X5EB-2226-SM-46MW4 180.3
GTEX-OXRO-0126-SM-2YUN4 179.3
GTEX-RTLS-0126-SM-447CA 178.8
GTEX-11TT1-2526-SM-5EGIB 174.1
GTEX-ZYFD-0126-SM-5GIDL 174.0
GTEX-Q2AI-1326-SM-2S1PL 173.9
Show all