GEN1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:3.3 FPKM
GTEx:2.4 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA020078

 

Antibody HPA021141

 

Endothelial cells

Medium   Medium  

Glandular cells

Medium   High  

Peripheral nerve/ganglion

Not available   Medium  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

3.3

overview Male, age 54
Sample 1
FPKM: 2.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 3.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 5.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 3.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 3.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 1.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 4.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

2.4

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.6
Samples: 149

Max RPKM: 1.9
Min RPKM: 0.1
Std RPKM: 0.3
Median RPKM: 0.5
GTEX-V955-1726-SM-4JBHF 1.9
GTEX-11DXY-2026-SM-5N9CZ 1.5
GTEX-13OW6-2226-SM-5N9FL 1.5
GTEX-Y5LM-1426-SM-5RQJL 1.5
GTEX-ZAJG-2626-SM-5S2NU 1.5
GTEX-XBED-1726-SM-47JYO 1.4
GTEX-WQUQ-2626-SM-4MVNP 1.3
GTEX-11EQ9-1526-SM-5PNY7 1.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 4.2
Samples: 196

Max RPKM: 13.7
Min RPKM: 0.1
Std RPKM: 3.2
Median RPKM: 3.8
GTEX-1211K-1726-SM-5FQUJ 13.7
GTEX-W5WG-2426-SM-4LMI6 13.5
GTEX-145MN-1726-SM-5SIA6 13.1
GTEX-ZV7C-1526-SM-5NQ72 12.5
GTEX-1122O-1526-SM-5N9CL 12.4
GTEX-XPVG-1826-SM-4B64X 12.3
GTEX-Y9LG-1526-SM-4WWDR 12.1
GTEX-P4PP-1426-SM-3NM9L 12.0
Show all