PLEC

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:21.1 FPKM
GTEx:37.5 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA025967

 

Antibody HPA029906

 

Antibody CAB003847

 

Endothelial cells

High   Medium   Low  

Glandular cells

High   High   Low  

Peripheral nerve/ganglion

Medium   Not available   Medium  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

21.1

overview Male, age 54
Sample 1
FPKM: 22.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 16.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 30.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 29.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 20.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 16.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 12.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

37.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 37.7
Samples: 149

Max RPKM: 57.3
Min RPKM: 21.5
Std RPKM: 7.2
Median RPKM: 37.1
GTEX-XAJ8-0726-SM-47JY5 57.3
GTEX-V955-1726-SM-4JBHF 56.2
GTEX-11DXY-2026-SM-5N9CZ 54.6
GTEX-14A5I-2426-SM-5Q5CP 51.5
GTEX-111CU-1226-SM-5EGIN 51.3
GTEX-X15G-1526-SM-4PQZM 51.0
GTEX-ZC5H-2426-SM-4WAZ6 50.8
GTEX-ZAB5-1426-SM-5HL9D 50.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 37.2
Samples: 196

Max RPKM: 144.3
Min RPKM: 19.3
Std RPKM: 11
Median RPKM: 36.2
GTEX-117YW-1826-SM-5PNY5 144.3
GTEX-111CU-1426-SM-5GZYP 77.1
GTEX-11TT1-1026-SM-5PNW7 67.7
GTEX-PWCY-1026-SM-48TD4 60.3
GTEX-XAJ8-0426-SM-47JYJ 57.9
GTEX-1399S-1926-SM-5J2M5 55.7
GTEX-S4Q7-0826-SM-4AD5E 54.2
GTEX-QV31-0826-SM-4R1KR 53.2
Show all