LCORL

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:3.2 FPKM
GTEx:0.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA028794

 

Antibody HPA028795

 

Endothelial cells

Low   Medium  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Medium   Low  
   
   

COLON - HPA RNA-seq

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Average FPKM

3.2

overview Male, age 54
Sample 1
FPKM: 3.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 4.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 3.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 3.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 2.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 1.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 2.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

0.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.6
Samples: 149

Max RPKM: 1.2
Min RPKM: 0.2
Std RPKM: 0.2
Median RPKM: 0.6
GTEX-11WQK-2526-SM-5CVL8 1.2
GTEX-13N2G-2226-SM-5IJCU 1.2
GTEX-13SLW-2826-SM-5Q5ES 1.2
GTEX-13X6K-2726-SM-5O9DG 1.2
GTEX-145ME-1126-SM-5SIAT 1.2
GTEX-1399R-2126-SM-5K7WZ 1.1
GTEX-ZAJG-2626-SM-5S2NU 1.1
GTEX-146FH-2426-SM-5Q5EW 1.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 1.0
Samples: 196

Max RPKM: 2.4
Min RPKM: 0.3
Std RPKM: 0.3
Median RPKM: 1
GTEX-139YR-2126-SM-5KM11 2.4
GTEX-R53T-1326-SM-48FCQ 2.4
GTEX-133LE-1526-SM-5IFEN 2.0
GTEX-132AR-2726-SM-5PNVN 1.9
GTEX-WHWD-1226-SM-4OOS1 1.9
GTEX-11P82-1026-SM-5BC5J 1.8
GTEX-OXRK-1726-SM-3NB16 1.8
GTEX-ZV7C-1526-SM-5NQ72 1.8
Show all