PNMA1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:16.7 FPKM
GTEx:31.7 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA003817

 

Antibody HPA015007

 

Endothelial cells

Not detected   Not detected  

Glandular cells

Low   Not detected  

Peripheral nerve/ganglion

Not available   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

16.7

overview Male, age 54
Sample 1
FPKM: 15.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 12.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 9.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 14.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 15.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 40.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 8.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

31.7

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 41.2
Samples: 149

Max RPKM: 78.9
Min RPKM: 12.3
Std RPKM: 11
Median RPKM: 41.3
GTEX-XV7Q-2226-SM-4BRVY 78.9
GTEX-1399R-2126-SM-5K7WZ 72.2
GTEX-11DXZ-1626-SM-5GIDI 70.2
GTEX-ZAB5-1426-SM-5HL9D 67.8
GTEX-131XE-1026-SM-5EGKE 63.2
GTEX-WHWD-1526-SM-4OORV 62.7
GTEX-WHPG-1626-SM-4M1ZL 62.3
GTEX-13111-1926-SM-5GCOL 59.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 22.2
Samples: 196

Max RPKM: 68.6
Min RPKM: 4.5
Std RPKM: 14.6
Median RPKM: 18.8
GTEX-U3ZH-1326-SM-4DXSF 68.6
GTEX-14AS3-1126-SM-5Q5CR 64.8
GTEX-T6MO-0826-SM-4DM51 51.4
GTEX-X5EB-0926-SM-46MVT 51.2
GTEX-SNMC-1126-SM-4DM5M 50.2
GTEX-145LS-2726-SM-5Q5D8 49.6
GTEX-145ME-0826-SM-5O9AF 49.3
GTEX-XAJ8-0426-SM-47JYJ 49.1
Show all