RNPEP

COLON - Expression summary

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RNA expression

HPA:45.1 FPKM
GTEx:22.4 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA036075

 

Endothelial cells

Low  

Glandular cells

Medium  

Peripheral nerve/ganglion

Medium  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

45.1

overview Male, age 54
Sample 1
FPKM: 46.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 48.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 50.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 38.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 39.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 42.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 51.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

22.4

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 12.9
Samples: 149

Max RPKM: 21.6
Min RPKM: 7.4
Std RPKM: 2.6
Median RPKM: 12.5
GTEX-14E6C-2226-SM-5QGQG 21.6
GTEX-YEC3-2026-SM-4WWFL 19.9
GTEX-V955-1726-SM-4JBHF 19.4
GTEX-Y5LM-1426-SM-5RQJL 19.3
GTEX-13SLW-2826-SM-5Q5ES 19.0
GTEX-13X6I-2726-SM-5Q5ET 18.5
GTEX-WQUQ-2626-SM-4MVNP 17.5
GTEX-YJ8A-1726-SM-5P9IQ 17.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 31.8
Samples: 196

Max RPKM: 75.6
Min RPKM: 5.3
Std RPKM: 15
Median RPKM: 32.8
GTEX-1399R-2226-SM-5P9JB 75.6
GTEX-T5JW-1126-SM-4DM5V 63.8
GTEX-Y5LM-1526-SM-4VDTA 62.4
GTEX-P4QT-1426-SM-3NMCX 61.8
GTEX-131XG-1826-SM-5LZV4 59.0
GTEX-XUJ4-2026-SM-4BOOW 58.7
GTEX-ZF2S-1926-SM-4WWAN 57.9
GTEX-O5YT-1426-SM-3MJHC 57.1
Show all