MSRA

COLON - Expression summary

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RNA expression

HPA:13.2 FPKM
GTEx:3.5 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA023804

 

Endothelial cells

Not detected  

Glandular cells

Medium  

Peripheral nerve/ganglion

Low  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

13.2

overview Male, age 54
Sample 1
FPKM: 10.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 10.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 9.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 7.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 12.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 25.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 17.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

3.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 3.3
Samples: 149

Max RPKM: 6.3
Min RPKM: 1
Std RPKM: 0.7
Median RPKM: 3.3
GTEX-1211K-1826-SM-5EGJ2 6.3
GTEX-YEC3-2026-SM-4WWFL 5.2
GTEX-ZDTS-2726-SM-5L3E2 4.8
GTEX-13FTW-2126-SM-5K7YG 4.6
GTEX-ZPCL-1626-SM-57WGC 4.6
GTEX-11TUW-2326-SM-5EQMO 4.5
GTEX-11ZU8-1126-SM-5EQ5K 4.5
GTEX-1212Z-1826-SM-5FQSH 4.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 3.6
Samples: 196

Max RPKM: 5.9
Min RPKM: 1.5
Std RPKM: 0.7
Median RPKM: 3.5
GTEX-Y5LM-1526-SM-4VDTA 5.9
GTEX-1122O-1526-SM-5N9CL 5.6
GTEX-R55G-1226-SM-48FDC 5.6
GTEX-131XG-1826-SM-5LZV4 5.2
GTEX-13W3W-2126-SM-5K7UX 5.2
GTEX-145MN-1726-SM-5SIA6 5.2
GTEX-T5JW-1126-SM-4DM5V 5.2
GTEX-ZV6S-1226-SM-59HLH 5.1
Show all