ISX

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:21.3 FPKM
GTEx:10.3 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA060328

 

Endothelial cells

Not detected  

Glandular cells

Medium  

Peripheral nerve/ganglion

Medium  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

21.3

overview Male, age 54
Sample 1
FPKM: 13.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 30.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 26.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 21.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 9.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 6.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 41.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

10.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.3
Samples: 149

Max RPKM: 7.2
Min RPKM: 0
Std RPKM: 1
Median RPKM: 0
GTEX-Y5LM-1426-SM-5RQJL 7.2
GTEX-XBED-1726-SM-47JYO 6.2
GTEX-YJ8A-1726-SM-5P9IQ 4.6
GTEX-YEC3-2026-SM-4WWFL 4.1
GTEX-V955-1726-SM-4JBHF 3.9
GTEX-WQUQ-2626-SM-4MVNP 2.4
GTEX-11EQ9-1526-SM-5PNY7 2.3
GTEX-11ONC-1926-SM-5GU75 1.9
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 20.3
Samples: 196

Max RPKM: 66.4
Min RPKM: 0
Std RPKM: 17.3
Median RPKM: 19.1
GTEX-WOFM-2026-SM-4OOSQ 66.4
GTEX-S4UY-0826-SM-4AD4Z 60.2
GTEX-13PL7-2526-SM-5IFGR 59.5
GTEX-132AR-2726-SM-5PNVN 58.7
GTEX-1399R-2226-SM-5P9JB 57.1
GTEX-14DAR-1526-SM-5RQIX 54.3
GTEX-ZT9W-1826-SM-51MQX 53.4
GTEX-ZYWO-1626-SM-5E44H 52.9
Show all