PARL

COLON - Expression summary

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RNA expression

HPA:32.6 FPKM
GTEx:28.9 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA019545

 

Endothelial cells

Not detected  

Glandular cells

Medium  

Peripheral nerve/ganglion

Low  
 
 

COLON - HPA RNA-seq

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Average FPKM

32.6

overview Male, age 54
Sample 1
FPKM: 24.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 27.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 26.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 24.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 29.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 45.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 50.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

28.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 30.7
Samples: 149

Max RPKM: 58
Min RPKM: 14.9
Std RPKM: 5.9
Median RPKM: 30.7
GTEX-1399U-2226-SM-5KLZI 58.0
GTEX-13O1R-2426-SM-5KLZZ 47.4
GTEX-ZT9W-1726-SM-51MS3 44.1
GTEX-ZTSS-1226-SM-51MSZ 43.3
GTEX-Y9LG-1326-SM-4VBQB 42.8
GTEX-1477Z-2126-SM-5Q5CM 41.7
GTEX-145ME-1126-SM-5SIAT 40.8
GTEX-ZPCL-1626-SM-57WGC 40.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 27.0
Samples: 196

Max RPKM: 46.8
Min RPKM: 11.3
Std RPKM: 4.9
Median RPKM: 27
GTEX-13U4I-2426-SM-5LU34 46.8
GTEX-11TTK-2426-SM-5PNYO 39.3
GTEX-11P81-1126-SM-5GU5G 39.0
GTEX-Y114-1526-SM-4TT79 38.3
GTEX-QMRM-1226-SM-447C6 37.3
GTEX-148VJ-2626-SM-5QGPI 37.2
GTEX-X5EB-0926-SM-46MVT 37.0
GTEX-1128S-1626-SM-5H12O 36.2
Show all