TCAP

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:0.2 FPKM
GTEx:1.6 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA026477

 

Antibody CAB004591

 

Endothelial cells

Not detected   Not detected  

Glandular cells

Low   Low  

Peripheral nerve/ganglion

Not available   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

0.2

overview Male, age 54
Sample 1
FPKM: 0.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 0.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 0.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 0.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 0.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 0.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 0.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

1.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 1.9
Samples: 149

Max RPKM: 22.9
Min RPKM: 0.2
Std RPKM: 2.1
Median RPKM: 1.5
GTEX-1477Z-2126-SM-5Q5CM 22.9
GTEX-ZAJG-2626-SM-5S2NU 9.7
GTEX-14A5I-2426-SM-5Q5CP 6.2
GTEX-139D8-2926-SM-5IJBM 6.0
GTEX-13N2G-2226-SM-5IJCU 5.8
GTEX-14E6C-2226-SM-5QGQG 4.6
GTEX-146FH-2426-SM-5Q5EW 4.4
GTEX-ZVT4-2626-SM-5N9GJ 4.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 1.2
Samples: 196

Max RPKM: 5.9
Min RPKM: 0.2
Std RPKM: 0.8
Median RPKM: 1.1
GTEX-13S86-1626-SM-5Q5C5 5.9
GTEX-11WQK-2126-SM-5EQME 4.2
GTEX-QEL4-1926-SM-4R1JI 4.1
GTEX-14E6E-1526-SM-5RQIG 3.5
GTEX-145MO-2426-SM-5NQ9W 3.4
GTEX-13O3O-2526-SM-5L3DR 3.1
GTEX-13OVI-2026-SM-5J1MU 3.0
GTEX-148VJ-2626-SM-5QGPI 3.0
Show all