HPSE

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:4.1 FPKM
GTEx:0.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Not available

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA055344

 

Antibody CAB009813

 

Endothelial cells

Not detected   Medium  

Glandular cells

Low   Medium  

Peripheral nerve/ganglion

Not available   Low  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

4.1

overview Male, age 54
Sample 1
FPKM: 4.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 3.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 3.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 3.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 6.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 3.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 3.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

0.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.2
Samples: 149

Max RPKM: 0.7
Min RPKM: 0
Std RPKM: 0.1
Median RPKM: 0.1
GTEX-WFON-1326-SM-4LVMN 0.7
GTEX-YEC3-2026-SM-4WWFL 0.6
GTEX-13SLW-2826-SM-5Q5ES 0.5
GTEX-13X6I-2726-SM-5Q5ET 0.5
GTEX-Y5LM-1426-SM-5RQJL 0.5
GTEX-ZQG8-2426-SM-57WEE 0.5
GTEX-ZY6K-1326-SM-5GZWP 0.5
GTEX-11DXX-1926-SM-5EGJK 0.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 1.5
Samples: 196

Max RPKM: 5.2
Min RPKM: 0
Std RPKM: 1.1
Median RPKM: 1.6
GTEX-144GM-1226-SM-5LU52 5.2
GTEX-111CU-1426-SM-5GZYP 4.9
GTEX-PWOO-1326-SM-48TCJ 4.3
GTEX-XUZC-1326-SM-4BRV2 4.1
GTEX-144GN-1126-SM-5LU33 3.9
GTEX-S4Q7-0826-SM-4AD5E 3.9
GTEX-132AR-2726-SM-5PNVN 3.4
GTEX-X15G-1326-SM-4PQZJ 3.4
Show all