QARS

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:26.1 FPKM
GTEx:50.3 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA036986

 

Antibody HPA036987

 

Endothelial cells

Low   Low  

Glandular cells

Medium   High  

Peripheral nerve/ganglion

Not detected   High  
   
   

COLON - HPA RNA-seq

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Average FPKM

26.1

overview Male, age 54
Sample 1
FPKM: 33.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 36.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 46.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 7.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 23.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 18.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 16.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

50.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 38.6
Samples: 149

Max RPKM: 67.9
Min RPKM: 17.2
Std RPKM: 6.8
Median RPKM: 38.5
GTEX-14E6C-2226-SM-5QGQG 67.9
GTEX-ZP4G-1526-SM-57WE5 53.5
GTEX-WFG8-1726-SM-4LVM6 51.8
GTEX-ZVT2-1726-SM-51MRO 51.7
GTEX-V955-1726-SM-4JBHF 51.5
GTEX-13OVI-2126-SM-5KM3U 51.0
GTEX-ZQG8-2426-SM-57WEE 48.1
GTEX-ZV6S-1126-SM-57WE9 48.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 62.0
Samples: 196

Max RPKM: 99.6
Min RPKM: 17.6
Std RPKM: 19.3
Median RPKM: 63.3
GTEX-XPVG-1826-SM-4B64X 99.6
GTEX-PWN1-1426-SM-48TDF 99.5
GTEX-T5JW-1126-SM-4DM5V 96.6
GTEX-XUJ4-2026-SM-4BOOW 96.6
GTEX-WOFM-2026-SM-4OOSQ 96.5
GTEX-WFON-1426-SM-4LVMT 94.8
GTEX-UJMC-1326-SM-4IHLS 94.1
GTEX-145LT-0926-SM-5LU9C 91.7
Show all