SYNPO

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:4.7 FPKM
GTEx:5.6 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Not detected
Keratinocytes:Low
Langerhans:Not detected
Melanocytes:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA034631

 

Antibody CAB033265

 

Antibody CAB037325

 

Fibroblasts

High   Not detected   Not detected  

Keratinocytes

Low   Medium   Low  

Langerhans

High   Medium   Not detected  

Melanocytes

Low   Not detected   Not detected  
     
     
     

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:Not detected
 
 
 

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA034631

 

Antibody CAB033265

 

Antibody CAB037325

 

Epidermal cells

Not detected   Medium   Not detected  
        
        
        
     
     
     

SKIN - HPA RNA-seq

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Average FPKM

4.7

overview Female, age 34
Sample 1
FPKM: 4.7
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 3.4
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 5.9

SKIN - GTEx RNA-seq

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Average RPKM

5.6

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 5.2
Samples: 250

Max RPKM: 16.4
Min RPKM: 0.8
Std RPKM: 2.5
Median RPKM: 4.6
GTEX-14E6C-2426-SM-5S2NF 16.4
GTEX-131XE-1626-SM-5K7VO 16.0
GTEX-WHSE-0126-SM-3NMBT 15.1
GTEX-WI4N-2726-SM-3LK7Y 15.1
GTEX-ZVTK-0226-SM-51MRG 13.9
GTEX-U8XE-0226-SM-4E3J3 12.4
GTEX-13OVJ-0826-SM-5J1OK 12.2
GTEX-11DZ1-2426-SM-5GZZX 11.4
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 6.0
Samples: 357

Max RPKM: 25.5
Min RPKM: 1.4
Std RPKM: 2.9
Median RPKM: 5.4
GTEX-ZZPT-0226-SM-5E43X 25.5
GTEX-11TUW-2726-SM-5EQLC 20.8
GTEX-ZTPG-0326-SM-5O9AX 15.9
GTEX-14A6H-0126-SM-5QGPK 15.2
GTEX-P4QR-0326-SM-5SI8P 14.4
GTEX-ZE7O-0126-SM-57WC1 14.2
GTEX-YJ8A-0426-SM-5IFID 13.2
GTEX-QEG5-0226-SM-2I5GI 12.7
Show all