GAA

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:16.1 FPKM
GTEx:17.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:High

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA026970

 

Antibody HPA029126

 

Endothelial cells

Low   Not detected  

Glandular cells

Not detected   Not detected  

Peripheral nerve/ganglion

Not detected   High  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

16.1

overview Male, age 54
Sample 1
FPKM: 22.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 22.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 18.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 11.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 27.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 7.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 3.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

17.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 17.9
Samples: 149

Max RPKM: 28.9
Min RPKM: 7.6
Std RPKM: 4
Median RPKM: 17.4
GTEX-YECK-2826-SM-5IFHF 28.9
GTEX-WFON-1326-SM-4LVMN 28.6
GTEX-13OW5-2826-SM-5KM1G 28.2
GTEX-X15G-1526-SM-4PQZM 28.2
GTEX-132NY-2726-SM-5PNY2 27.2
GTEX-ZQG8-2426-SM-57WEE 26.8
GTEX-13OW6-2226-SM-5N9FL 26.0
GTEX-147GR-2826-SM-5RQK8 26.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 17.8
Samples: 196

Max RPKM: 34.7
Min RPKM: 5.9
Std RPKM: 4.1
Median RPKM: 17.7
GTEX-ZXES-1626-SM-5NQ7L 34.7
GTEX-WFON-1426-SM-4LVMT 26.9
GTEX-11EM3-1526-SM-5A5KN 26.4
GTEX-UJMC-1326-SM-4IHLS 25.8
GTEX-SNOS-1226-SM-4DM5H 25.2
GTEX-S341-1426-SM-4AD6U 25.0
GTEX-11DXX-1826-SM-5H126 24.8
GTEX-PLZ6-0926-SM-3P5ZQ 24.8
Show all