ALCAM

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:11.1 FPKM
GTEx:9.2 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA010926

 

Antibody CAB002148

 

Endothelial cells

High   Not detected  

Glandular cells

Low   Low  

Peripheral nerve/ganglion

Not available   High  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

11.1

overview Male, age 54
Sample 1
FPKM: 15.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 11.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 10.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 7.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 14.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 8.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 10.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

9.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 11.4
Samples: 149

Max RPKM: 40.1
Min RPKM: 3.1
Std RPKM: 5.7
Median RPKM: 9.7
GTEX-ZVZQ-2626-SM-59HLB 40.1
GTEX-ZDTS-2726-SM-5L3E2 35.0
GTEX-ZE7O-2626-SM-51MSS 26.5
GTEX-147GR-2826-SM-5RQK8 24.1
GTEX-13G51-2126-SM-5IJD9 23.7
GTEX-12ZZY-2726-SM-5EQ45 22.9
GTEX-ZVT3-2826-SM-5GU6A 22.9
GTEX-ZXES-1726-SM-5E43G 21.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 7.0
Samples: 196

Max RPKM: 35.7
Min RPKM: 2.7
Std RPKM: 4.2
Median RPKM: 5.7
GTEX-Z93S-2426-SM-5HL8N 35.7
GTEX-XAJ8-0426-SM-47JYJ 23.9
GTEX-14BMV-2426-SM-5S2PP 21.3
GTEX-11O72-2226-SM-5PNW2 20.8
GTEX-P78B-1726-SM-3P5ZV 20.7
GTEX-XGQ4-1226-SM-4AT67 17.9
GTEX-13FHP-2426-SM-5KLZ5 17.6
GTEX-12ZZZ-2426-SM-5GCNN 17.0
Show all