COL3A1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:216.3 FPKM
GTEx:195.5 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA007583

 

Antibody CAB016766

 

Endothelial cells

Not available   Low  

Glandular cells

Medium   Not detected  

Peripheral nerve/ganglion

Not available   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

216.3

overview Male, age 54
Sample 1
FPKM: 280.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 140.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 108.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 81.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 475.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 312.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 115.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

195.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 230.2
Samples: 149

Max RPKM: 816.1
Min RPKM: 42.8
Std RPKM: 111.9
Median RPKM: 203.3
GTEX-11TT1-0926-SM-5GU5M 816.1
GTEX-13X6I-2726-SM-5Q5ET 650.0
GTEX-YECK-2826-SM-5IFHF 571.3
GTEX-13SLW-2826-SM-5Q5ES 515.9
GTEX-1339X-1726-SM-5P9J9 495.1
GTEX-131XG-1526-SM-5GCNQ 443.1
GTEX-111CU-1226-SM-5EGIN 441.9
GTEX-147JS-2626-SM-5S2UX 441.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 160.8
Samples: 196

Max RPKM: 662
Min RPKM: 15.9
Std RPKM: 127.6
Median RPKM: 117.7
GTEX-144GN-1126-SM-5LU33 662.0
GTEX-U3ZH-1326-SM-4DXSF 659.6
GTEX-147JS-2526-SM-5S2Q8 654.2
GTEX-XAJ8-0426-SM-47JYJ 620.3
GTEX-13O3O-2526-SM-5L3DR 615.4
GTEX-1339X-1626-SM-5IJDN 538.5
GTEX-O5YT-1426-SM-3MJHC 528.0
GTEX-Z93S-2426-SM-5HL8N 508.7
Show all