OTUB1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:35.5 FPKM
GTEx:26.5 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA039176

 

Antibody CAB072836

 

Endothelial cells

Not detected   Medium  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Medium   Not available  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

35.5

overview Male, age 54
Sample 1
FPKM: 31.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 38.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 38.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 33.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 37.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 37.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 32.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

26.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 24.7
Samples: 149

Max RPKM: 34.4
Min RPKM: 19.2
Std RPKM: 2.6
Median RPKM: 24.7
GTEX-13O1R-2426-SM-5KLZZ 34.4
GTEX-1399U-2226-SM-5KLZI 33.2
GTEX-13OW6-2226-SM-5N9FL 31.3
GTEX-WQUQ-2626-SM-4MVNP 30.4
GTEX-X15G-1526-SM-4PQZM 30.4
GTEX-11DXX-1926-SM-5EGJK 29.1
GTEX-ZLFU-1426-SM-4WWEU 28.6
GTEX-11DXY-2026-SM-5N9CZ 28.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 28.2
Samples: 196

Max RPKM: 46.3
Min RPKM: 11.4
Std RPKM: 4.9
Median RPKM: 27.7
GTEX-1399R-2226-SM-5P9JB 46.3
GTEX-146FQ-1926-SM-5NQBY 44.2
GTEX-UJHI-1126-SM-4IHLN 40.6
GTEX-SNOS-1226-SM-4DM5H 40.2
GTEX-T5JW-1126-SM-4DM5V 39.2
GTEX-XUJ4-2026-SM-4BOOW 38.4
GTEX-XV7Q-2126-SM-4BRVX 38.4
GTEX-TML8-1326-SM-4DXTO 37.6
Show all