NXN

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:6.6 FPKM
GTEx:22.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA022850

 

Antibody HPA023566

 

Endothelial cells

Not detected   High  

Glandular cells

Not detected   Not detected  

Peripheral nerve/ganglion

Not detected   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

6.6

overview Male, age 54
Sample 1
FPKM: 4.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 4.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 1.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 4.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 7.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 20.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 2.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

22.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 31.7
Samples: 149

Max RPKM: 47.3
Min RPKM: 15.8
Std RPKM: 6.2
Median RPKM: 31.5
GTEX-ZPCL-1626-SM-57WGC 47.3
GTEX-12WSG-2426-SM-5EQLZ 46.7
GTEX-ZPU1-1726-SM-4WWFV 46.4
GTEX-XUZC-1526-SM-4BRV4 44.2
GTEX-11ZU8-1126-SM-5EQ5K 42.8
GTEX-132NY-2726-SM-5PNY2 42.5
GTEX-11DXX-1926-SM-5EGJK 42.2
GTEX-X15G-1526-SM-4PQZM 42.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 14.0
Samples: 196

Max RPKM: 48.5
Min RPKM: 1.1
Std RPKM: 11.9
Median RPKM: 10.2
GTEX-14AS3-1126-SM-5Q5CR 48.5
GTEX-12WSL-1626-SM-5GCMU 41.3
GTEX-13U4I-2426-SM-5LU34 39.8
GTEX-111YS-1626-SM-5GZZ9 39.2
GTEX-RWS6-1826-SM-47JXX 38.5
GTEX-XXEK-1926-SM-4BRVD 37.0
GTEX-ZYVF-2826-SM-5GIDK 36.1
GTEX-T6MO-0826-SM-4DM51 35.9
Show all