MVD

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:15.0 FPKM
GTEx:13.6 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA041404

 

Antibody HPA048250

 

Endothelial cells

Low   Medium  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Not available   Low  
   
   

COLON - HPA RNA-seq

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Average FPKM

15.0

overview Male, age 54
Sample 1
FPKM: 50.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 9.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 14.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 10.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 9.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 5.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 5.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

13.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 9.2
Samples: 149

Max RPKM: 25.2
Min RPKM: 5.5
Std RPKM: 2.5
Median RPKM: 8.8
GTEX-V955-1726-SM-4JBHF 25.2
GTEX-XBED-1726-SM-47JYO 21.3
GTEX-12ZZW-2426-SM-5DUWE 14.3
GTEX-X15G-1526-SM-4PQZM 13.5
GTEX-11TT1-0926-SM-5GU5M 13.4
GTEX-ZAJG-2626-SM-5S2NU 12.8
GTEX-12WSL-1826-SM-5LZW9 12.5
GTEX-13X6I-2726-SM-5Q5ET 12.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 18.0
Samples: 196

Max RPKM: 109.1
Min RPKM: 5.1
Std RPKM: 14.8
Median RPKM: 13.4
GTEX-144GN-1126-SM-5LU33 109.1
GTEX-QDVN-1326-SM-48TZ3 103.7
GTEX-131XG-1826-SM-5LZV4 93.2
GTEX-XBED-1526-SM-4AT5W 61.3
GTEX-11TT1-1026-SM-5PNW7 59.5
GTEX-QCQG-1626-SM-48U26 52.6
GTEX-T5JW-1126-SM-4DM5V 52.3
GTEX-111CU-1426-SM-5GZYP 51.3
Show all