CA4

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:164.3 FPKM
GTEx:23.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA011089

 

Antibody HPA017258

 

Endothelial cells

Not detected   Not detected  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Not detected   Low  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

164.3

overview Male, age 54
Sample 1
FPKM: 165.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 150.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 203.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 280.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 182.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 19.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 148.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

23.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 1.3
Samples: 149

Max RPKM: 8.7
Min RPKM: 0
Std RPKM: 1.3
Median RPKM: 0.9
GTEX-XBED-1726-SM-47JYO 8.7
GTEX-ZPCL-1626-SM-57WGC 8.2
GTEX-13FHO-2726-SM-5K7VG 6.0
GTEX-Y5LM-1426-SM-5RQJL 5.3
GTEX-146FH-2426-SM-5Q5EW 4.7
GTEX-11EQ9-1526-SM-5PNY7 4.5
GTEX-V955-1726-SM-4JBHF 4.2
GTEX-12696-1926-SM-5EGJT 4.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 46.2
Samples: 196

Max RPKM: 251.1
Min RPKM: 0
Std RPKM: 52.2
Median RPKM: 32.3
GTEX-UJHI-1126-SM-4IHLN 251.1
GTEX-13PL7-2526-SM-5IFGR 232.0
GTEX-14E6E-1526-SM-5RQIG 206.3
GTEX-1399R-2226-SM-5P9JB 197.7
GTEX-U3ZN-2126-SM-4DXU1 194.3
GTEX-11P82-1026-SM-5BC5J 190.1
GTEX-WOFM-2026-SM-4OOSQ 189.9
GTEX-R55D-1826-SM-48FEF 187.4
Show all