ENDOG

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:7.9 FPKM
GTEx:5.0 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA021335

 

Antibody HPA021830

 

Endothelial cells

Medium   Not detected  

Glandular cells

Medium   High  

Peripheral nerve/ganglion

Medium   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

7.9

overview Male, age 54
Sample 1
FPKM: 10.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 9.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 12.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 11.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 4.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 3.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 4.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

5.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 2.3
Samples: 149

Max RPKM: 7.1
Min RPKM: 0.2
Std RPKM: 1.2
Median RPKM: 2.1
GTEX-YEC3-2026-SM-4WWFL 7.1
GTEX-ZLV1-1326-SM-4WWER 5.9
GTEX-ZLFU-1426-SM-4WWEU 5.4
GTEX-WQUQ-2626-SM-4MVNP 5.2
GTEX-11DXX-1926-SM-5EGJK 5.1
GTEX-V955-1726-SM-4JBHF 4.9
GTEX-Y3I4-1126-SM-4TT7Y 4.4
GTEX-11EQ9-1526-SM-5PNY7 4.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 7.7
Samples: 196

Max RPKM: 22.5
Min RPKM: 0.3
Std RPKM: 4.9
Median RPKM: 7.3
GTEX-XUJ4-2026-SM-4BOOW 22.5
GTEX-Q2AI-0926-SM-48U1F 22.4
GTEX-T5JW-1126-SM-4DM5V 20.3
GTEX-1399R-2226-SM-5P9JB 20.0
GTEX-R55G-1226-SM-48FDC 18.9
GTEX-TML8-1326-SM-4DXTO 18.1
GTEX-139YR-2126-SM-5KM11 17.4
GTEX-PWN1-1426-SM-48TDF 16.9
Show all