MARS

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:21.8 FPKM
GTEx:26.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA004125

 

Antibody CAB017097

 

Endothelial cells

Medium   Medium  

Glandular cells

Medium   High  

Peripheral nerve/ganglion

Medium   High  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

21.8

overview Male, age 54
Sample 1
FPKM: 14.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 20.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 21.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 10.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 23.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 35.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 26.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

26.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 28.2
Samples: 149

Max RPKM: 58.9
Min RPKM: 10.4
Std RPKM: 8.3
Median RPKM: 26.8
GTEX-11WQK-2526-SM-5CVL8 58.9
GTEX-XAJ8-0726-SM-47JY5 56.8
GTEX-11TT1-0926-SM-5GU5M 54.9
GTEX-13O1R-2426-SM-5KLZZ 53.3
GTEX-ZTTD-2626-SM-57WEX 51.7
GTEX-11I78-1326-SM-5PNY9 49.1
GTEX-131XG-1526-SM-5GCNQ 48.4
GTEX-12WSL-1826-SM-5LZW9 46.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 25.3
Samples: 196

Max RPKM: 76.7
Min RPKM: 9.1
Std RPKM: 9.9
Median RPKM: 23.7
GTEX-XYKS-2226-SM-4E3IU 76.7
GTEX-11TT1-1026-SM-5PNW7 61.5
GTEX-11WQK-2126-SM-5EQME 60.7
GTEX-XAJ8-0426-SM-47JYJ 57.6
GTEX-VJYA-2026-SM-4KL1K 56.9
GTEX-PWOO-1326-SM-48TCJ 56.8
GTEX-13OVJ-1726-SM-5IJDZ 47.3
GTEX-X15G-1326-SM-4PQZJ 44.8
Show all