ATMIN

COLON - Expression summary

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RNA expression

HPA:11.3 FPKM
GTEx:7.7 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA066900

 

Endothelial cells

Low  

Glandular cells

Medium  

Peripheral nerve/ganglion

Low  
 
 

COLON - HPA RNA-seq

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Average FPKM

11.3

overview Male, age 54
Sample 1
FPKM: 10.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 12.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 12.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 11.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 11.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 8.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 12.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

7.7

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 7.6
Samples: 149

Max RPKM: 11.7
Min RPKM: 4.1
Std RPKM: 1.6
Median RPKM: 7.6
GTEX-13111-1926-SM-5GCOL 11.7
GTEX-131XG-1526-SM-5GCNQ 11.1
GTEX-ZZ64-0826-SM-5E449 10.9
GTEX-1211K-1826-SM-5EGJ2 10.8
GTEX-Y9LG-1326-SM-4VBQB 10.8
GTEX-145ME-1126-SM-5SIAT 10.7
GTEX-ZPIC-2626-SM-57WE2 10.6
GTEX-139T6-1426-SM-5P9J7 10.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 7.8
Samples: 196

Max RPKM: 13.4
Min RPKM: 1.8
Std RPKM: 1.4
Median RPKM: 7.7
GTEX-X5EB-0926-SM-46MVT 13.4
GTEX-Y114-1526-SM-4TT79 11.6
GTEX-145MN-1726-SM-5SIA6 10.9
GTEX-S341-1426-SM-4AD6U 10.7
GTEX-ZXES-1626-SM-5NQ7L 10.6
GTEX-148VJ-2626-SM-5QGPI 10.5
GTEX-ZZ64-0726-SM-5GZX4 10.4
GTEX-OXRL-1426-SM-3NM9E 10.3
Show all