CKB

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:163.8 FPKM
GTEx:555.2 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA001254

 

Antibody CAB047313

 

Endothelial cells

Not available   Not detected  

Glandular cells

Not detected   Medium  

Peripheral nerve/ganglion

Not available   Not detected  
   
   

COLON - HPA RNA-seq

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Average FPKM

163.8

overview Male, age 54
Sample 1
FPKM: 97.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 409.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 117.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 362.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 94.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 51.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 13.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

555.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 611.0
Samples: 149

Max RPKM: 1195.4
Min RPKM: 127.2
Std RPKM: 200.1
Median RPKM: 619.8
GTEX-13CF2-1826-SM-5N9GK 1195.4
GTEX-13G51-2126-SM-5IJD9 993.8
GTEX-147JS-2626-SM-5S2UX 975.7
GTEX-WHPG-1626-SM-4M1ZL 953.5
GTEX-X15G-1526-SM-4PQZM 949.2
GTEX-1212Z-1826-SM-5FQSH 941.7
GTEX-117XS-2226-SM-5GIE1 938.3
GTEX-139UW-2326-SM-5KM1Y 931.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 499.3
Samples: 196

Max RPKM: 1524.4
Min RPKM: 43.4
Std RPKM: 257.2
Median RPKM: 479.6
GTEX-R55G-1226-SM-48FDC 1524.4
GTEX-13O21-2426-SM-5MR4A 1353.0
GTEX-1122O-1526-SM-5N9CL 1303.7
GTEX-14DAR-1526-SM-5RQIX 1107.8
GTEX-XPVG-1826-SM-4B64X 1107.3
GTEX-14E6E-1526-SM-5RQIG 1027.5
GTEX-U3ZM-1126-SM-4DXUB 1020.6
GTEX-OHPM-1426-SM-3TW8Y 980.5
Show all