GHITM

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:163.8 FPKM
GTEx:97.3 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Not available
 

Antibody staining

Antibody HPA016464

 

Antibody HPA061664

 

Endothelial cells

Not detected   Low  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Low   Not available  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

163.8

overview Male, age 54
Sample 1
FPKM: 114.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 158.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 193.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 204.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 126.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 152.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 196.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

97.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 75.2
Samples: 149

Max RPKM: 118.8
Min RPKM: 33.6
Std RPKM: 15.9
Median RPKM: 74.6
GTEX-1399U-2226-SM-5KLZI 118.8
GTEX-Y9LG-1326-SM-4VBQB 111.8
GTEX-131XG-1526-SM-5GCNQ 111.7
GTEX-YEC3-2026-SM-4WWFL 108.3
GTEX-ZP4G-1526-SM-57WE5 105.5
GTEX-XAJ8-0726-SM-47JY5 104.7
GTEX-ZTSS-1226-SM-51MSZ 103.5
GTEX-ZT9W-1726-SM-51MS3 103.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 119.4
Samples: 196

Max RPKM: 233.6
Min RPKM: 39.3
Std RPKM: 40.9
Median RPKM: 118.5
GTEX-Y5LM-1526-SM-4VDTA 233.6
GTEX-111CU-1426-SM-5GZYP 232.9
GTEX-131XG-1826-SM-5LZV4 231.4
GTEX-U4B1-1126-SM-4DXV3 220.4
GTEX-11P82-1026-SM-5BC5J 206.1
GTEX-Q2AI-0926-SM-48U1F 204.6
GTEX-R55G-1226-SM-48FDC 204.2
GTEX-ZT9W-1826-SM-51MQX 201.5
Show all