FASTK

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:15.1 FPKM
GTEx:32.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA031621

 

Antibody CAB032539

 

Endothelial cells

Low   Low  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Medium   Not available  
   
   

COLON - HPA RNA-seq

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Average FPKM

15.1

overview Male, age 54
Sample 1
FPKM: 18.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 18.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 13.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 17.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 13.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 15.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 9.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

32.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 29.9
Samples: 149

Max RPKM: 50.7
Min RPKM: 15.4
Std RPKM: 7.2
Median RPKM: 28.5
GTEX-139D8-2926-SM-5IJBM 50.7
GTEX-X15G-1526-SM-4PQZM 49.9
GTEX-11DXY-2026-SM-5N9CZ 48.3
GTEX-V955-1726-SM-4JBHF 46.9
GTEX-13OW8-2726-SM-5L3FZ 46.8
GTEX-ZP4G-1526-SM-57WE5 44.9
GTEX-139TS-2226-SM-5J2N1 44.8
GTEX-145MH-2726-SM-5QGQ6 43.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 36.0
Samples: 196

Max RPKM: 62.5
Min RPKM: 6.3
Std RPKM: 9.6
Median RPKM: 36.2
GTEX-XUJ4-2026-SM-4BOOW 62.5
GTEX-1399R-2226-SM-5P9JB 60.6
GTEX-PLZ5-1126-SM-3P613 56.7
GTEX-S4P3-1226-SM-4AD4Y 55.9
GTEX-TML8-1326-SM-4DXTO 54.6
GTEX-XPVG-1826-SM-4B64X 52.8
GTEX-XV7Q-2126-SM-4BRVX 51.9
GTEX-13111-0726-SM-5DUVE 50.7
Show all