FNDC1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:2.4 FPKM
GTEx:6.5 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA030962

 

Antibody HPA030963

 

Endothelial cells

Not detected   Low  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Medium   Medium  
   
   

COLON - HPA RNA-seq

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Average FPKM

2.4

overview Male, age 54
Sample 1
FPKM: 2.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 0.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 1.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 0.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 0.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 9.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 1.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

6.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 9.3
Samples: 149

Max RPKM: 53.1
Min RPKM: 0.9
Std RPKM: 8.7
Median RPKM: 6.4
GTEX-147JS-2626-SM-5S2UX 53.1
GTEX-11PRG-2026-SM-5GU5F 46.0
GTEX-117XS-2226-SM-5GIE1 38.9
GTEX-145MO-2626-SM-5QGPD 38.4
GTEX-13G51-2126-SM-5IJD9 33.5
GTEX-11GS4-1826-SM-5HL4T 28.4
GTEX-139TS-2226-SM-5J2N1 24.7
GTEX-132NY-2726-SM-5PNY2 24.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 3.7
Samples: 196

Max RPKM: 52.2
Min RPKM: 0
Std RPKM: 6.7
Median RPKM: 1.3
GTEX-145LS-2726-SM-5Q5D8 52.2
GTEX-12ZZZ-2426-SM-5GCNN 41.5
GTEX-111VG-2226-SM-5N9DU 36.3
GTEX-11ZVC-2126-SM-5EGJ1 28.0
GTEX-147JS-2526-SM-5S2Q8 22.3
GTEX-11O72-2226-SM-5PNW2 21.0
GTEX-U3ZH-1326-SM-4DXSF 16.8
GTEX-14BMV-2426-SM-5S2PP 16.7
Show all