CAMLG

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:17.7 FPKM
GTEx:22.2 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA052636

 

Antibody HPA056472

 

Endothelial cells

Low   Not detected  

Glandular cells

Medium   Low  

Peripheral nerve/ganglion

High   High  
   
   
   

COLON - HPA RNA-seq

? »

Average FPKM

17.7

overview Male, age 54
Sample 1
FPKM: 18.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 17.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 14.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 20.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 16.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 20.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 16.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

22.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 26.4
Samples: 149

Max RPKM: 57.3
Min RPKM: 14.2
Std RPKM: 7
Median RPKM: 25.2
GTEX-1399U-2226-SM-5KLZI 57.3
GTEX-ZPCL-1626-SM-57WGC 48.1
GTEX-148VJ-2426-SM-5NQ9Y 41.5
GTEX-1477Z-2126-SM-5Q5CM 40.3
GTEX-145ME-1126-SM-5SIAT 39.7
GTEX-XV7Q-2226-SM-4BRVY 38.6
GTEX-13OVI-2126-SM-5KM3U 38.1
GTEX-ZAJG-2626-SM-5S2NU 38.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 18.1
Samples: 196

Max RPKM: 54.6
Min RPKM: 7.6
Std RPKM: 8.8
Median RPKM: 14.8
GTEX-11TTK-2426-SM-5PNYO 54.6
GTEX-13OVI-2026-SM-5J1MU 50.7
GTEX-T6MO-0826-SM-4DM51 38.6
GTEX-148VJ-2626-SM-5QGPI 38.5
GTEX-ZYVF-2826-SM-5GIDK 38.5
GTEX-12WSL-1626-SM-5GCMU 36.4
GTEX-11WQK-2126-SM-5EQME 36.3
GTEX-RWS6-1826-SM-47JXX 36.1
Show all