APEH

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:40.3 FPKM
GTEx:24.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA029700

 

Antibody HPA029701

 

Antibody HPA029702

 

Antibody HPA029703

 

Endothelial cells

Not detected   Not detected   Not detected   Low  

Glandular cells

Medium   Medium   Medium   High  

Peripheral nerve/ganglion

Not available   Not detected   Not detected   Low  
       
       
       

COLON - HPA RNA-seq

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Average FPKM

40.3

overview Male, age 54
Sample 1
FPKM: 28.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 45.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 43.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 33.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 38.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 34.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 57.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

24.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 17.2
Samples: 149

Max RPKM: 30.3
Min RPKM: 8.2
Std RPKM: 4.3
Median RPKM: 16.5
GTEX-11TT1-0926-SM-5GU5M 30.3
GTEX-YEC3-2026-SM-4WWFL 29.6
GTEX-WQUQ-2626-SM-4MVNP 26.8
GTEX-1399U-2226-SM-5KLZI 25.4
GTEX-13FTW-2126-SM-5K7YG 25.2
GTEX-X15G-1526-SM-4PQZM 25.1
GTEX-XBED-1726-SM-47JYO 24.8
GTEX-131XG-1526-SM-5GCNQ 24.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 32.7
Samples: 196

Max RPKM: 65.5
Min RPKM: 6.6
Std RPKM: 12.9
Median RPKM: 32.2
GTEX-1399R-2226-SM-5P9JB 65.5
GTEX-U4B1-1126-SM-4DXV3 61.1
GTEX-PWOO-1326-SM-48TCJ 60.3
GTEX-XUJ4-2026-SM-4BOOW 59.9
GTEX-Q2AI-0926-SM-48U1F 59.1
GTEX-144GN-1126-SM-5LU33 59.0
GTEX-146FQ-1926-SM-5NQBY 58.2
GTEX-131XG-1826-SM-5LZV4 57.6
Show all