ERMAP

COLON - Expression summary

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RNA expression

HPA:4.8 FPKM
GTEx:4.0 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA042573

 

Endothelial cells

Low  

Glandular cells

High  

Peripheral nerve/ganglion

Low  
 
 

COLON - HPA RNA-seq

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Average FPKM

4.8

overview Male, age 54
Sample 1
FPKM: 5.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 6.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 5.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 2.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 3.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 3.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 5.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

4.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 3.6
Samples: 149

Max RPKM: 6.5
Min RPKM: 1.1
Std RPKM: 0.9
Median RPKM: 3.5
GTEX-145ME-1126-SM-5SIAT 6.5
GTEX-YJ8O-1426-SM-5PNV9 6.4
GTEX-WFON-1326-SM-4LVMN 5.7
GTEX-11ZTS-1526-SM-5N9G7 5.5
GTEX-12ZZY-2726-SM-5EQ45 5.5
GTEX-V955-1726-SM-4JBHF 5.5
GTEX-11DXZ-1626-SM-5GIDI 5.4
GTEX-13VXT-2026-SM-5L3EW 5.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 4.4
Samples: 196

Max RPKM: 9.8
Min RPKM: 1
Std RPKM: 1.3
Median RPKM: 4.4
GTEX-UJMC-1326-SM-4IHLS 9.8
GTEX-1122O-1526-SM-5N9CL 8.0
GTEX-11P7K-1526-SM-5EGI7 7.8
GTEX-11DXZ-1726-SM-5H12M 7.6
GTEX-145MN-1726-SM-5SIA6 7.5
GTEX-ZLV1-1226-SM-4WWBX 7.4
GTEX-W5WG-2426-SM-4LMI6 7.0
GTEX-13O21-2426-SM-5MR4A 6.9
Show all