HPS3

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:6.2 FPKM
GTEx:4.2 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA046281

 

Endothelial cells

Low  

Glandular cells

High  

Peripheral nerve/ganglion

Not detected  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

6.2

overview Male, age 54
Sample 1
FPKM: 5.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 6.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 5.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 3.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 7.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 6.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 8.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

4.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 4.2
Samples: 149

Max RPKM: 8.8
Min RPKM: 1.1
Std RPKM: 1.3
Median RPKM: 4.1
GTEX-131XG-1526-SM-5GCNQ 8.8
GTEX-WHWD-1526-SM-4OORV 7.7
GTEX-ZPU1-1726-SM-4WWFV 7.3
GTEX-146FH-2426-SM-5Q5EW 6.8
GTEX-XV7Q-2226-SM-4BRVY 6.8
GTEX-ZYFG-1826-SM-5GZWX 6.7
GTEX-ZAB5-1426-SM-5HL9D 6.6
GTEX-132AR-2826-SM-5IJFV 6.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 4.3
Samples: 196

Max RPKM: 7.4
Min RPKM: 1.6
Std RPKM: 1
Median RPKM: 4.3
GTEX-U3ZH-1326-SM-4DXSF 7.4
GTEX-11P81-1126-SM-5GU5G 7.0
GTEX-ZV6S-1226-SM-59HLH 6.9
GTEX-R53T-1326-SM-48FCQ 6.7
GTEX-WHWD-1226-SM-4OOS1 6.5
GTEX-WFG7-1526-SM-4LVMG 6.4
GTEX-111YS-1626-SM-5GZZ9 6.3
GTEX-14AS3-1126-SM-5Q5CR 6.3
Show all