ALPI

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:5.8 FPKM
GTEx:1.7 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA038764

 

Antibody HPA038765

 

Antibody HPA051699

 

Endothelial cells

Not detected   Not detected   Not detected  

Glandular cells

Not detected   Not detected   Not detected  

Peripheral nerve/ganglion

Not detected   Not detected   Not available  
     
     

COLON - HPA RNA-seq

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Average FPKM

5.8

overview Male, age 54
Sample 1
FPKM: 11.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 7.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 4.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 7.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 4.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 2.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 2.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

1.7

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.1
Samples: 149

Max RPKM: 18.7
Min RPKM: 0
Std RPKM: 1.5
Median RPKM: 0
GTEX-YEC3-2026-SM-4WWFL 18.7
GTEX-Y5LM-1426-SM-5RQJL 1.3
GTEX-XBED-1726-SM-47JYO 1.1
GTEX-V955-1726-SM-4JBHF 0.9
GTEX-WFON-1326-SM-4LVMN 0.8
GTEX-ZPCL-1626-SM-57WGC 0.7
GTEX-11EQ9-1526-SM-5PNY7 0.5
GTEX-1211K-1826-SM-5EGJ2 0.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 3.3
Samples: 196

Max RPKM: 22.8
Min RPKM: 0
Std RPKM: 3.6
Median RPKM: 2.6
GTEX-1122O-1526-SM-5N9CL 22.8
GTEX-Y5LM-1526-SM-4VDTA 19.0
GTEX-14E6E-1526-SM-5RQIG 16.7
GTEX-R55G-1226-SM-48FDC 15.7
GTEX-ZVT2-1926-SM-5GU5T 14.7
GTEX-13FTW-1826-SM-5IJEN 12.2
GTEX-131XG-1826-SM-5LZV4 12.0
GTEX-XUZC-1326-SM-4BRV2 10.1
Show all