DIRAS3

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:0.6 FPKM
GTEx:2.1 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA028483

 

Antibody HPA028557

 

Antibody HPA029384

 

Endothelial cells

Medium   Low   Low  

Glandular cells

Medium   High   Medium  

Peripheral nerve/ganglion

Medium   High   Low  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

0.6

overview Male, age 54
Sample 1
FPKM: 0.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 0.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 0.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 0.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 0.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 0.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 0.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

2.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 2.8
Samples: 149

Max RPKM: 7
Min RPKM: 0.5
Std RPKM: 1.1
Median RPKM: 2.7
GTEX-13PVQ-2726-SM-5L3H7 7.0
GTEX-1477Z-2126-SM-5Q5CM 6.5
GTEX-14A5I-2426-SM-5Q5CP 5.9
GTEX-11DXY-2026-SM-5N9CZ 5.6
GTEX-14E6C-2226-SM-5QGQG 5.5
GTEX-ZYY3-2226-SM-5E45A 5.5
GTEX-ZVT4-2626-SM-5N9GJ 5.0
GTEX-ZVT3-2826-SM-5GU6A 4.9
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 1.4
Samples: 196

Max RPKM: 6
Min RPKM: 0.3
Std RPKM: 1
Median RPKM: 1
GTEX-X5EB-0926-SM-46MVT 6.0
GTEX-ZYFC-2626-SM-5NQ6S 5.7
GTEX-148VJ-2626-SM-5QGPI 5.2
GTEX-11TUW-2026-SM-5EQL8 5.1
GTEX-145LS-2726-SM-5Q5D8 3.6
GTEX-147JS-2526-SM-5S2Q8 3.5
GTEX-Y114-1526-SM-4TT79 3.5
GTEX-YEC4-1926-SM-5IFHJ 3.5
Show all