SYVN1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:20.6 FPKM
GTEx:18.5 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA005480

 

Antibody HPA024300

 

Antibody CAB037030

 

Endothelial cells

Medium   Medium   Low  

Glandular cells

Medium   Medium   Medium  

Peripheral nerve/ganglion

High   High   Not available  
     
     

COLON - HPA RNA-seq

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Average FPKM

20.6

overview Male, age 54
Sample 1
FPKM: 19.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 19.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 19.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 11.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 21.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 27.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 25.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

18.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 15.9
Samples: 149

Max RPKM: 31.8
Min RPKM: 7.6
Std RPKM: 3.4
Median RPKM: 15.6
GTEX-132AR-2826-SM-5IJFV 31.8
GTEX-139D8-2926-SM-5IJBM 28.3
GTEX-ZAJG-2626-SM-5S2NU 26.0
GTEX-148VJ-2426-SM-5NQ9Y 25.0
GTEX-14E6C-2226-SM-5QGQG 24.7
GTEX-WQUQ-2626-SM-4MVNP 22.2
GTEX-XUW1-1826-SM-4BOQD 21.7
GTEX-11WQK-2526-SM-5CVL8 21.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 21.1
Samples: 196

Max RPKM: 42.3
Min RPKM: 8.7
Std RPKM: 5.7
Median RPKM: 20.1
GTEX-PWOO-1326-SM-48TCJ 42.3
GTEX-WHWD-1226-SM-4OOS1 38.7
GTEX-Q2AH-1226-SM-48TZL 38.4
GTEX-13S86-1626-SM-5Q5C5 37.2
GTEX-XBED-1526-SM-4AT5W 35.5
GTEX-R53T-1326-SM-48FCQ 35.2
GTEX-132AR-2726-SM-5PNVN 32.9
GTEX-13OVJ-1726-SM-5IJDZ 32.9
Show all