CSTB

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:40.5 FPKM
GTEx:38.3 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA017380

 

Antibody HPA058557

 

Antibody CAB047320

 

Endothelial cells

Not detected   Not detected   Not detected  

Glandular cells

Not detected   Low   Not detected  

Peripheral nerve/ganglion

Not detected   Not detected   Not detected  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

40.5

overview Male, age 54
Sample 1
FPKM: 35.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 34.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 31.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 63.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 51.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 34.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 33.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

38.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 30.5
Samples: 149

Max RPKM: 51.6
Min RPKM: 14.6
Std RPKM: 7.1
Median RPKM: 29.9
GTEX-132AR-2826-SM-5IJFV 51.6
GTEX-147GR-2826-SM-5RQK8 48.0
GTEX-ZAJG-2626-SM-5S2NU 47.8
GTEX-12ZZW-2426-SM-5DUWE 46.9
GTEX-13X6I-2726-SM-5Q5ET 44.7
GTEX-ZE7O-2626-SM-51MSS 43.9
GTEX-11EI6-2626-SM-5PNVT 43.5
GTEX-1339X-1726-SM-5P9J9 43.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 46.2
Samples: 196

Max RPKM: 103.3
Min RPKM: 15.9
Std RPKM: 16.9
Median RPKM: 42.7
GTEX-1399R-2226-SM-5P9JB 103.3
GTEX-11TT1-1026-SM-5PNW7 92.2
GTEX-146FQ-1926-SM-5NQBY 87.5
GTEX-111CU-1426-SM-5GZYP 85.8
GTEX-Y5LM-1526-SM-4VDTA 85.0
GTEX-131XG-1826-SM-5LZV4 82.2
GTEX-144GN-1126-SM-5LU33 80.0
GTEX-Y3IK-1826-SM-4WWDS 79.6
Show all