BSDC1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:28.4 FPKM
GTEx:18.3 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA031358

 

Antibody HPA031360

 

Endothelial cells

Medium   Low  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Medium   Low  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

28.4

overview Male, age 54
Sample 1
FPKM: 31.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 32.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 27.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 25.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 23.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 26.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 31.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

18.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 17.7
Samples: 149

Max RPKM: 26
Min RPKM: 10.3
Std RPKM: 3.2
Median RPKM: 17.6
GTEX-11ZTS-1526-SM-5N9G7 26.0
GTEX-147JS-2626-SM-5S2UX 25.2
GTEX-13N2G-2226-SM-5IJCU 24.4
GTEX-139D8-2926-SM-5IJBM 24.3
GTEX-ZAJG-2626-SM-5S2NU 24.3
GTEX-147GR-2826-SM-5RQK8 23.7
GTEX-ZVT4-2626-SM-5N9GJ 23.5
GTEX-11EI6-2626-SM-5PNVT 23.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 18.8
Samples: 196

Max RPKM: 27.1
Min RPKM: 12.5
Std RPKM: 2.5
Median RPKM: 18.7
GTEX-RM2N-0926-SM-48FD1 27.1
GTEX-R55D-1826-SM-48FEF 26.1
GTEX-OXRK-1726-SM-3NB16 25.1
GTEX-UJMC-1326-SM-4IHLS 24.9
GTEX-ZVT2-1926-SM-5GU5T 23.7
GTEX-139YR-2126-SM-5KM11 23.6
GTEX-XQ8I-2126-SM-4BOOM 23.5
GTEX-S4UY-0826-SM-4AD4Z 23.4
Show all