EFCAB14

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:32.5 FPKM
GTEx:20.1 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA011224

 

Antibody HPA011938

 

Endothelial cells

Not detected   Low  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Medium   Medium  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

32.5

overview Male, age 54
Sample 1
FPKM: 29.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 42.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 31.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 28.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 32.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 26.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 37.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

20.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 19.9
Samples: 149

Max RPKM: 27.4
Min RPKM: 13.3
Std RPKM: 3
Median RPKM: 19.8
GTEX-13111-1926-SM-5GCOL 27.4
GTEX-13SLW-2826-SM-5Q5ES 27.2
GTEX-145LS-2926-SM-5O99G 26.5
GTEX-12WSG-2426-SM-5EQLZ 26.3
GTEX-13VXT-2026-SM-5L3EW 25.9
GTEX-111YS-1826-SM-5GIEP 25.7
GTEX-YEC3-2026-SM-4WWFL 25.0
GTEX-WHWD-1526-SM-4OORV 24.9
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 20.3
Samples: 196

Max RPKM: 28.3
Min RPKM: 10
Std RPKM: 3.2
Median RPKM: 20.2
GTEX-13O3O-2526-SM-5L3DR 28.3
GTEX-P4PP-1426-SM-3NM9L 27.5
GTEX-ZXES-1626-SM-5NQ7L 27.5
GTEX-13OVG-1426-SM-5K7VP 27.4
GTEX-X5EB-0926-SM-46MVT 27.4
GTEX-11VI4-1526-SM-5EQKC 27.1
GTEX-111YS-1626-SM-5GZZ9 26.9
GTEX-S3XE-1126-SM-4AD4N 26.3
Show all