HLCS

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:5.2 FPKM
GTEx:2.0 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA017379

 

Endothelial cells

Low  

Glandular cells

Medium  

Peripheral nerve/ganglion

Medium  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

5.2

overview Male, age 54
Sample 1
FPKM: 4.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 5.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 6.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 3.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 5.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 4.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 7.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

2.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 2.0
Samples: 149

Max RPKM: 3.2
Min RPKM: 1
Std RPKM: 0.3
Median RPKM: 2
GTEX-131XG-1526-SM-5GCNQ 3.2
GTEX-12WSG-2426-SM-5EQLZ 2.9
GTEX-13111-1926-SM-5GCOL 2.9
GTEX-Y114-1626-SM-4TT7I 2.9
GTEX-Y9LG-1326-SM-4VBQB 2.9
GTEX-WFON-1326-SM-4LVMN 2.7
GTEX-WFG8-1726-SM-4LVM6 2.6
GTEX-ZP4G-1526-SM-57WE5 2.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 2.1
Samples: 196

Max RPKM: 3.2
Min RPKM: 0.2
Std RPKM: 0.4
Median RPKM: 2.1
GTEX-144GN-1126-SM-5LU33 3.2
GTEX-PWOO-1326-SM-48TCJ 3.2
GTEX-X5EB-0926-SM-46MVT 3.0
GTEX-Y114-1526-SM-4TT79 3.0
GTEX-O5YW-1426-SM-3MJHF 2.9
GTEX-X15G-1326-SM-4PQZJ 2.9
GTEX-13OW6-2126-SM-5N9GL 2.8
GTEX-13W3W-2126-SM-5K7UX 2.8
Show all