SV2A

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:1.5 FPKM
GTEx:3.0 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA007863

 

Antibody CAB002226

 

Endothelial cells

Not detected   Not detected  

Glandular cells

Not detected   Not detected  

Peripheral nerve/ganglion

Not available   Low  
   
   
   

COLON - HPA RNA-seq

? »

Average FPKM

1.5

overview Male, age 54
Sample 1
FPKM: 0.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 0.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 0.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 1.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 2.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 2.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 1.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

3.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 3.5
Samples: 149

Max RPKM: 9.5
Min RPKM: 1
Std RPKM: 1.4
Median RPKM: 3.3
GTEX-13O1R-2426-SM-5KLZZ 9.5
GTEX-14E6C-2226-SM-5QGQG 8.9
GTEX-11WQK-2526-SM-5CVL8 8.1
GTEX-131XG-1526-SM-5GCNQ 7.2
GTEX-148VJ-2426-SM-5NQ9Y 6.9
GTEX-YJ8A-1726-SM-5P9IQ 6.9
GTEX-12WSL-1826-SM-5LZW9 6.4
GTEX-WFON-1326-SM-4LVMN 6.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 2.5
Samples: 196

Max RPKM: 10.9
Min RPKM: 0.2
Std RPKM: 1.7
Median RPKM: 2
GTEX-11WQK-2126-SM-5EQME 10.9
GTEX-1339X-1626-SM-5IJDN 7.7
GTEX-QLQ7-1126-SM-4R1KN 7.0
GTEX-13OVI-2026-SM-5J1MU 6.7
GTEX-XAJ8-0426-SM-47JYJ 6.7
GTEX-YEC4-1926-SM-5IFHJ 6.7
GTEX-14BMV-2426-SM-5S2PP 6.4
GTEX-148VJ-2626-SM-5QGPI 6.3
Show all