SLC13A3

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:0.5 FPKM
GTEx:0.3 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA014353

 

Antibody HPA014736

 

Endothelial cells

Low   Not detected  

Glandular cells

Medium   Not detected  

Peripheral nerve/ganglion

Low   Not detected  
   
   

COLON - HPA RNA-seq

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Average FPKM

0.5

overview Male, age 54
Sample 1
FPKM: 0.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 0.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 0.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 0.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 0.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 0.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 0.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

0.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.4
Samples: 149

Max RPKM: 1.1
Min RPKM: 0.1
Std RPKM: 0.1
Median RPKM: 0.4
GTEX-ZAB4-2426-SM-5HL8A 1.1
GTEX-12696-1926-SM-5EGJT 0.9
GTEX-13PVQ-2726-SM-5L3H7 0.9
GTEX-14A5H-1626-SM-5SIAN 0.9
GTEX-11WQK-2526-SM-5CVL8 0.8
GTEX-13OW8-2726-SM-5L3FZ 0.8
GTEX-XXEK-1826-SM-4BRVC 0.8
GTEX-YJ8O-1426-SM-5PNV9 0.8
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 0.2
Samples: 196

Max RPKM: 1.5
Min RPKM: 0
Std RPKM: 0.2
Median RPKM: 0.1
GTEX-11WQK-2126-SM-5EQME 1.5
GTEX-11TUW-2026-SM-5EQL8 1.0
GTEX-S341-1426-SM-4AD6U 0.8
GTEX-ZYFC-2626-SM-5NQ6S 0.8
GTEX-11GSP-1626-SM-5986N 0.7
GTEX-11TTK-2426-SM-5PNYO 0.7
GTEX-145MO-2426-SM-5NQ9W 0.7
GTEX-148VJ-2626-SM-5QGPI 0.7
Show all