HPD

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:0.5 FPKM
GTEx:0.6 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA038321

 

Antibody HPA038322

 

Endothelial cells

Not detected   Not detected  

Glandular cells

Not detected   Medium  

Peripheral nerve/ganglion

Not available   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

0.5

overview Male, age 54
Sample 1
FPKM: 1.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 0.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 0.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 0.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 0.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 0.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 0.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

0.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.7
Samples: 149

Max RPKM: 2
Min RPKM: 0.1
Std RPKM: 0.4
Median RPKM: 0.6
GTEX-13X6I-2726-SM-5Q5ET 2.0
GTEX-11DXZ-1626-SM-5GIDI 1.7
GTEX-11TT1-0926-SM-5GU5M 1.7
GTEX-12WSJ-1426-SM-5GCON 1.7
GTEX-WFG7-1626-SM-4LVMF 1.7
GTEX-ZPIC-2626-SM-57WE2 1.7
GTEX-ZYY3-2226-SM-5E45A 1.7
GTEX-111YS-1826-SM-5GIEP 1.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 0.4
Samples: 196

Max RPKM: 2.3
Min RPKM: 0
Std RPKM: 0.3
Median RPKM: 0.3
GTEX-XAJ8-0426-SM-47JYJ 2.3
GTEX-13W3W-2126-SM-5K7UX 2.0
GTEX-O5YT-1426-SM-3MJHC 2.0
GTEX-12WSJ-1526-SM-5GCNI 1.8
GTEX-144GN-1126-SM-5LU33 1.6
GTEX-QLQ7-1126-SM-4R1KN 1.5
GTEX-12ZZZ-2426-SM-5GCNN 1.3
GTEX-XYKS-2226-SM-4E3IU 1.2
Show all