BRE

COLON - Expression summary

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RNA expression

HPA:24.5 FPKM
GTEx:14.1 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA017926

 

Endothelial cells

Medium  

Glandular cells

High  

Peripheral nerve/ganglion

Medium  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

24.5

overview Male, age 54
Sample 1
FPKM: 16.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 18.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 18.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 16.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 21.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 43.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 37.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

14.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 14.8
Samples: 149

Max RPKM: 22.5
Min RPKM: 8.8
Std RPKM: 2.6
Median RPKM: 14.3
GTEX-1399U-2226-SM-5KLZI 22.5
GTEX-WFG8-1726-SM-4LVM6 22.0
GTEX-13FTW-2126-SM-5K7YG 21.6
GTEX-13CF3-1326-SM-5LZXZ 21.3
GTEX-ZVT2-1726-SM-51MRO 21.0
GTEX-Y9LG-1326-SM-4VBQB 20.5
GTEX-14E6E-1726-SM-5S2R6 20.3
GTEX-1211K-1826-SM-5EGJ2 19.9
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 13.4
Samples: 196

Max RPKM: 21
Min RPKM: 9
Std RPKM: 2
Median RPKM: 13.3
GTEX-13FH7-1526-SM-5J2N6 21.0
GTEX-13OVI-2026-SM-5J1MU 20.6
GTEX-YEC4-1926-SM-5IFHJ 19.6
GTEX-QLQ7-1126-SM-4R1KN 19.5
GTEX-1399R-2226-SM-5P9JB 19.0
GTEX-13U4I-2426-SM-5LU34 18.7
GTEX-O5YT-1426-SM-3MJHC 18.6
GTEX-XV7Q-2126-SM-4BRVX 18.1
Show all