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COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:0.1 FPKM
GTEx:0.3 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA007042

 

Antibody CAB022682

 

Endothelial cells

Not detected   Not detected  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Not detected   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

0.1

overview Male, age 54
Sample 1
FPKM: 0.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 0.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 0.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 0.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 0.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 0.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 0.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

0.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.3
Samples: 149

Max RPKM: 2.3
Min RPKM: 0.1
Std RPKM: 0.1
Median RPKM: 0.3
GTEX-1477Z-2126-SM-5Q5CM 2.3
GTEX-13N2G-2226-SM-5IJCU 0.8
GTEX-ZYT6-2826-SM-5GICX 0.8
GTEX-11ONC-1926-SM-5GU75 0.5
GTEX-139D8-2926-SM-5IJBM 0.5
GTEX-13VXT-2026-SM-5L3EW 0.5
GTEX-146FH-2426-SM-5Q5EW 0.5
GTEX-14E6C-2226-SM-5QGQG 0.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 0.2
Samples: 196

Max RPKM: 0.7
Min RPKM: 0
Std RPKM: 0.1
Median RPKM: 0.2
GTEX-WH7G-1326-SM-4LVMS 0.7
GTEX-ZXES-1626-SM-5NQ7L 0.7
GTEX-VJYA-2026-SM-4KL1K 0.6
GTEX-11P81-1126-SM-5GU5G 0.5
GTEX-14C38-2626-SM-5RQI4 0.5
GTEX-111YS-1626-SM-5GZZ9 0.4
GTEX-11ONC-2026-SM-5HL61 0.4
GTEX-12KS4-2426-SM-5LU8P 0.4
Show all