CHODL

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:2.3 FPKM
GTEx:1.1 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA017282

 

Endothelial cells

Not detected  

Glandular cells

Medium  

Peripheral nerve/ganglion

Not detected  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

2.3

overview Male, age 54
Sample 1
FPKM: 1.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 2.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 0.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 2.0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 6.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 1.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 2.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

1.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 1.6
Samples: 149

Max RPKM: 9.6
Min RPKM: 0.1
Std RPKM: 1.4
Median RPKM: 1.1
GTEX-13G51-2126-SM-5IJD9 9.6
GTEX-117XS-2226-SM-5GIE1 7.2
GTEX-ZVZQ-2626-SM-59HLB 6.7
GTEX-132NY-2726-SM-5PNY2 6.5
GTEX-YJ8O-1426-SM-5PNV9 5.9
GTEX-11GS4-1826-SM-5HL4T 5.2
GTEX-12ZZY-2726-SM-5EQ45 4.6
GTEX-11DXY-2026-SM-5N9CZ 4.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 0.6
Samples: 196

Max RPKM: 5.4
Min RPKM: 0
Std RPKM: 0.8
Median RPKM: 0.3
GTEX-14BMV-2426-SM-5S2PP 5.4
GTEX-12ZZZ-2426-SM-5GCNN 5.3
GTEX-145LS-2726-SM-5Q5D8 4.1
GTEX-13FHP-2426-SM-5KLZ5 4.0
GTEX-111VG-2226-SM-5N9DU 3.6
GTEX-11ZVC-2126-SM-5EGJ1 3.3
GTEX-147JS-2526-SM-5S2Q8 3.0
GTEX-11WQK-2126-SM-5EQME 2.9
Show all