CLGN

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:0.7 FPKM
GTEx:1.4 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA048761

 

Antibody HPA058627

 

Antibody CAB020709

 

Endothelial cells

Low   Not detected   Not detected  

Glandular cells

Low   Not detected   Not detected  

Peripheral nerve/ganglion

Not available   Not detected   Medium  
     
     

COLON - HPA RNA-seq

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Average FPKM

0.7

overview Male, age 54
Sample 1
FPKM: 1.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 1.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 0.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 0.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 0.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 0.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 0.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

1.4

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 1.8
Samples: 149

Max RPKM: 15.3
Min RPKM: 0.1
Std RPKM: 2.4
Median RPKM: 0.9
GTEX-Y9LG-1326-SM-4VBQB 15.3
GTEX-13FH7-1626-SM-5J2O9 14.2
GTEX-117YX-0526-SM-5EGJH 11.8
GTEX-1211K-1826-SM-5EGJ2 9.7
GTEX-13CF3-1326-SM-5LZXZ 8.6
GTEX-11WQK-2526-SM-5CVL8 6.7
GTEX-131XG-1526-SM-5GCNQ 6.7
GTEX-14BMU-1326-SM-5RQIH 5.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 0.9
Samples: 196

Max RPKM: 11.8
Min RPKM: 0
Std RPKM: 1.6
Median RPKM: 0.4
GTEX-X5EB-0926-SM-46MVT 11.8
GTEX-11WQK-2126-SM-5EQME 10.3
GTEX-T6MO-0826-SM-4DM51 6.9
GTEX-ZV6S-1226-SM-59HLH 6.8
GTEX-12WSL-1626-SM-5GCMU 6.4
GTEX-S3XE-1126-SM-4AD4N 6.1
GTEX-1339X-1626-SM-5IJDN 5.2
GTEX-111YS-1626-SM-5GZZ9 5.1
Show all