CAST

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:132.9 FPKM
GTEx:30.2 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Medium
Keratinocytes:Medium
Langerhans:Medium
Melanocytes:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA036881

 

Antibody HPA036882

 

Antibody CAB009491

 

Fibroblasts

Medium   Medium   Medium  

Keratinocytes

Medium   Medium   High  

Langerhans

Medium   Medium   Medium  

Melanocytes

Medium   Medium   Low  
     
     
     

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:Medium
 
 
 

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA036881

 

Antibody HPA036882

 

Antibody CAB009491

 

Epidermal cells

Medium   Medium   High  
        
        
        
     
     
     

SKIN - HPA RNA-seq

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Average FPKM

132.9

overview Female, age 34
Sample 1
FPKM: 135.5
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 179.8
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 83.4

SKIN - GTEx RNA-seq

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Average RPKM

30.2

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 29.6
Samples: 250

Max RPKM: 56.4
Min RPKM: 13.2
Std RPKM: 7.1
Median RPKM: 28.9
GTEX-12WSK-2126-SM-5CVNC 56.4
GTEX-13O61-1426-SM-5KM3D 49.5
GTEX-14E6C-2426-SM-5S2NF 49.5
GTEX-131XF-2626-SM-5EQ6K 48.8
GTEX-12C56-1526-SM-5FQUQ 47.7
GTEX-145MO-2826-SM-5LU96 47.5
GTEX-ZAJG-1526-SM-5CVML 45.6
GTEX-11WQK-1026-SM-5EQLX 44.7
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 30.8
Samples: 357

Max RPKM: 61.8
Min RPKM: 14.5
Std RPKM: 7.7
Median RPKM: 30
GTEX-13OVI-1426-SM-5L3EY 61.8
GTEX-13YAN-0326-SM-5O9DF 57.9
GTEX-T8EM-1026-SM-3DB7M 55.5
GTEX-PLZ6-1426-SM-5S2TR 54.3
GTEX-12WSK-2326-SM-5GCOH 53.7
GTEX-131XF-2126-SM-5DUWS 52.7
GTEX-11TT1-2526-SM-5EGIB 52.4
GTEX-14C5O-0126-SM-5SI6N 52.2
Show all