CWC27

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:11.9 FPKM
GTEx:6.4 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA020344

 

Antibody HPA024149

 

Endothelial cells

Medium   Low  

Glandular cells

High   Medium  

Peripheral nerve/ganglion

High   Low  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

11.9

overview Male, age 54
Sample 1
FPKM: 10.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 13.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 11.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 9.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 13.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 13.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 11.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

6.4

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 7.2
Samples: 149

Max RPKM: 10.9
Min RPKM: 2.4
Std RPKM: 1.3
Median RPKM: 7.2
GTEX-1399R-2126-SM-5K7WZ 10.9
GTEX-131XE-1026-SM-5EGKE 10.7
GTEX-146FH-2426-SM-5Q5EW 10.5
GTEX-11GS4-1826-SM-5HL4T 10.3
GTEX-ZF28-2526-SM-57WFH 10.0
GTEX-12WSG-2426-SM-5EQLZ 9.8
GTEX-131XG-1526-SM-5GCNQ 9.5
GTEX-ZTTD-2626-SM-57WEX 9.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 5.6
Samples: 196

Max RPKM: 9.7
Min RPKM: 2
Std RPKM: 1.4
Median RPKM: 5.5
GTEX-12WSL-1626-SM-5GCMU 9.7
GTEX-13U4I-2426-SM-5LU34 9.6
GTEX-14AS3-1126-SM-5Q5CR 9.6
GTEX-XXEK-1926-SM-4BRVD 9.6
GTEX-12ZZZ-2426-SM-5GCNN 9.5
GTEX-1128S-1626-SM-5H12O 8.7
GTEX-111YS-1626-SM-5GZZ9 8.5
GTEX-145LS-2726-SM-5Q5D8 8.5
Show all