UBC

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:503.3 FPKM
GTEx:422.5 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Medium
Keratinocytes:Medium
Langerhans:Medium
Melanocytes:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA041344

 

Antibody HPA049132

 

Antibody CAB000362

 

Antibody CAB005419

 

Fibroblasts

Medium   High   Medium   Medium  

Keratinocytes

Low   High   Medium   Medium  

Langerhans

High   High   Medium   Medium  

Melanocytes

Medium   Medium   Medium   Medium  
       
       
       

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:Medium
 
 
 

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA041344

 

Antibody HPA049132

 

Antibody CAB000362

 

Antibody CAB005419

 

Epidermal cells

Medium   High   Medium   Medium  
          
          
          
       
       
       

SKIN - HPA RNA-seq

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Average FPKM

503.3

overview Female, age 34
Sample 1
FPKM: 617.2
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 525.8
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 366.9

SKIN - GTEx RNA-seq

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Average RPKM

422.5

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 454.8
Samples: 250

Max RPKM: 1150.4
Min RPKM: 206
Std RPKM: 157.3
Median RPKM: 428.3
GTEX-13O3O-2326-SM-5IJD6 1150.4
GTEX-ZU9S-1826-SM-5NQ9E 1065.7
GTEX-13QBU-1226-SM-5LU4G 850.4
GTEX-XMD2-2126-SM-4YCF8 838.5
GTEX-145MF-0926-SM-5Q5EA 825.5
GTEX-13N1W-2426-SM-5IJD1 798.9
GTEX-14E6C-2426-SM-5S2NF 792.9
GTEX-13112-0126-SM-5P9IU 792.8
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 390.1
Samples: 357

Max RPKM: 1083.7
Min RPKM: 192.3
Std RPKM: 114.5
Median RPKM: 372.6
GTEX-VJWN-0126-SM-3GIK7 1083.7
GTEX-X4XY-0226-SM-4E3IZ 760.7
GTEX-UPJH-0326-SM-3GADU 759.5
GTEX-OXRO-0126-SM-2YUN4 749.4
GTEX-XMD2-0126-SM-4YCDU 743.1
GTEX-SN8G-0126-SM-32PLI 689.7
GTEX-11DZ1-0126-SM-5985Q 682.7
GTEX-RVPU-2226-SM-2XCAQ 656.6
Show all