APIP

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:11.5 FPKM
GTEx:3.7 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA021188

 

Antibody HPA024131

 

Endothelial cells

Low   Not detected  

Glandular cells

High   High  

Peripheral nerve/ganglion

Low   Not available  
   
   

COLON - HPA RNA-seq

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Average FPKM

11.5

overview Male, age 54
Sample 1
FPKM: 14.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 13.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 12.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 7.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 7.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 15.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 9.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

3.7

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 3.6
Samples: 149

Max RPKM: 9.1
Min RPKM: 1.6
Std RPKM: 1.1
Median RPKM: 3.3
GTEX-ZE7O-2626-SM-51MSS 9.1
GTEX-13OW6-2226-SM-5N9FL 8.3
GTEX-13OW8-2726-SM-5L3FZ 6.6
GTEX-145MO-2626-SM-5QGPD 6.5
GTEX-ZTSS-1226-SM-51MSZ 6.3
GTEX-WQUQ-2626-SM-4MVNP 6.2
GTEX-1477Z-2126-SM-5Q5CM 6.0
GTEX-ZVT2-1726-SM-51MRO 5.9
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 3.8
Samples: 196

Max RPKM: 18.4
Min RPKM: 1
Std RPKM: 1.7
Median RPKM: 3.5
GTEX-PWOO-1326-SM-48TCJ 18.4
GTEX-QDVN-1326-SM-48TZ3 10.7
GTEX-144GN-1126-SM-5LU33 9.2
GTEX-XUZC-1326-SM-4BRV2 8.3
GTEX-ZYWO-1626-SM-5E44H 8.0
GTEX-Q2AI-0926-SM-48U1F 7.8
GTEX-XMK1-1726-SM-4B64Z 7.1
GTEX-X15G-1326-SM-4PQZJ 6.9
Show all