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COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:0.9 FPKM
GTEx:2.0 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA008057

 

Antibody CAB002059

 

Endothelial cells

Low   Not detected  

Glandular cells

Medium   Not detected  

Peripheral nerve/ganglion

High   Not available  
   
   

COLON - HPA RNA-seq

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Average FPKM

0.9

overview Male, age 54
Sample 1
FPKM: 0.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 0.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 0.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 1.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 1.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 1.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 1.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

2.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 2.7
Samples: 149

Max RPKM: 8.5
Min RPKM: 0
Std RPKM: 1.7
Median RPKM: 2.4
GTEX-12ZZW-2426-SM-5DUWE 8.5
GTEX-12696-1926-SM-5EGJT 8.3
GTEX-X4EO-2726-SM-4E3HS 7.9
GTEX-11WQK-2526-SM-5CVL8 7.4
GTEX-148VJ-2426-SM-5NQ9Y 7.3
GTEX-12ZZY-2726-SM-5EQ45 7.2
GTEX-ZAJG-2626-SM-5S2NU 6.6
GTEX-WFON-1326-SM-4LVMN 6.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 1.3
Samples: 196

Max RPKM: 9.1
Min RPKM: 0
Std RPKM: 1.4
Median RPKM: 0.7
GTEX-14BMV-2426-SM-5S2PP 9.1
GTEX-12ZZZ-2426-SM-5GCNN 8.6
GTEX-145LS-2726-SM-5Q5D8 5.9
GTEX-13FHP-2426-SM-5KLZ5 5.3
GTEX-U3ZH-1326-SM-4DXSF 5.2
GTEX-11O72-2226-SM-5PNW2 4.7
GTEX-S341-1426-SM-4AD6U 4.6
GTEX-V955-1626-SM-4JBHJ 4.5
Show all